STRINGSTRING
AT1G48100 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48100" - Polygalacturonase in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G48100Polygalacturonase; Polygalacturonase not involved in the final stages of pod shatter (475 aa)    
Predicted Functional Partners:
AT5G19730
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (383 aa)
   
 
  0.754
QRT1
QUARTET 1; Pectinesterase required for cell type-specific pectin degradation to separate microspores (380 aa)
       
  0.753
AT4G08380
Proline-rich extensin-like family protein (437 aa)
           
  0.743
AT3G47540
Putative chitinase (283 aa)
           
  0.738
AT3G07950
Rhomboid protein-related; Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis (304 aa)
           
  0.738
AT2G43600
Chitinase-like protein (273 aa)
           
  0.738
AT5G64640
Putative pectinesterase/pectinesterase inhibitor 64; Acts in the modification of cell walls via demethylesterification of cell wall pectin (602 aa)
       
  0.714
AT5G61680
Putative pectinesterase 63; Acts in the modification of cell walls via demethylesterification of cell wall pectin (338 aa)
       
  0.714
PMEPCRF
Pectin methylesterase PCR fragment F; Acts in the modification of cell walls via demethylesterification of cell wall pectin (587 aa)
       
  0.714
AT5G51500
Putative pectinesterase/pectinesterase inhibitor 60; Acts in the modification of cell walls via demethylesterification of cell wall pectin (540 aa)
       
  0.714
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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