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AT1G48150 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48150" - MADS-box domain-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48150MADS-box domain-containing protein (323 aa)    
Predicted Functional Partners:
AGL101
AGAMOUS-like 101 (120 aa)
       
 
  0.808
AGL52
AGAMOUS-like 52 (329 aa)
       
 
  0.785
AGL49
AGAMOUS-like 49; Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction (284 aa)
       
 
  0.784
AGL82
AGAMOUS-like 82; Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction (294 aa)
       
 
  0.784
AGL26
Root Specific (368 aa)
       
 
  0.757
AGL90
AGAMOUS-like 90; Probable transcription factor (320 aa)
       
 
  0.754
AGL65
AGAMOUS-like 65; Probable transcription factor that forms a heterodimer with the MADS-box protein AGL104 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth (389 aa)
       
 
  0.747
AGL78
AGAMOUS-like 78 (341 aa)
       
 
  0.733
AT4G32820
Tetratricopeptide repeat domain-containing protein (1872 aa)
       
  0.723
AGL72
AGAMOUS-like 72; MADS-box transcription factor that acts with AGL42 and AGL71 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1 (211 aa)
       
 
  0.720
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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