STRINGSTRING
AT1G48200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48200" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48200Uncharacterized protein (118 aa)    
Predicted Functional Partners:
AT5G54750
Transport protein particle (TRAPP) component (199 aa)
     
        0.435
AT1G67350
Uncharacterized protein (98 aa)
     
        0.435
ARFA1F
ADP-ribosylation factor A1F (181 aa)
     
        0.435
AT2G02050
Putative NADH-ubiquinone oxidoreductase B18 subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) (103 aa)
     
        0.429
AT3G52730
Ubiquinol-cytochrome c reductase subunit 9 (72 aa)
     
        0.428
ATOZI1
Uncharacterized protein (80 aa)
     
        0.425
ATDAD1
DEFENDER AGAINST APOPTOTIC DEATH 1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. Possesses cell death-inhibiting activity (115 aa)
     
        0.424
SAR1B
GTP-binding protein SAR1B; Involved in transport from the endoplasmic reticulum to the Golgi apparatus (193 aa)
     
        0.423
AT4G08520
Coatomer subunit zeta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity) (181 aa)
     
        0.422
PFD6
Prefoldin 6 (129 aa)
     
        0.421
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]