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AT1G48220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48220" - Protein kinase superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G48220Protein kinase superfamily protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in cellular_component unknown; Expressed in synergid; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, catalytic domain (InterPro-IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro-IPR001245), Protein kinase-like domain (InterPro-IPR011009), Serine/threonine-protein kinase, active site (InterPro-IPR008271); BEST Ar [...] (364 aa)    
Predicted Functional Partners:
AT5G01980
Uncharacterized protein T7H20_30; RING/U-box superfamily protein; Its function is described as zinc ion binding; Expressed in 22 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841), Zinc finger, C3HC4 RING-type (InterPro-IPR018957); BEST Arabidopsis thaliana protein match is- RING/U-box superfamily protein (TAIR-AT5G08139.1); Has 7827 Blast hits to 7813 proteins in 270 species- Archae - 0; Bacteria - 9; Metazoa - 2445; Fungi - 565; Plants - 3731; Viruses - 72; Other Eukaryotes - 1005 (source- NCBI BLink) (493 aa)
     
 
  0.531
AT1G60000
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as RNA binding, nucleotide binding, nucleic acid binding; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- chloroplast RNA-binding protein 31B (TAIR-AT5G50250.1); Has 32490 Blast hits to 20923 proteins in 885 species- Archae - 20; Bacteri [...] (258 aa)
       
 
  0.528
RPH1
Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae (201 aa)
           
  0.512
MT3
Metallothionein-like protein 3; Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of copper (Cu) and zinc (Zn). Plays a role in Cu homeostasis, specifically in the remobilization of Cu from senescing leaves. The mobilization of Cu from internal sources is important for seed development (69 aa)
           
  0.511
ATSYTF
C2 domain-containing protein; ATSYTF; Its function is described as molecular_function unknown; Involved in biological_process unknown; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- C2 membrane targeting protein (InterPro-IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro-IPR008973), C2 calcium-dependent membrane targeting (InterPro-IPR000008); BEST Arabidopsis thaliana protein match is- Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR-AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 spec [...] (815 aa)
       
 
  0.500
AT2G42550
Protein kinase superfamily protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in cellular_component unknown; Contains the following InterPro domains- Protein kinase, catalytic domain (InterPro-IPR000719), Serine/threonine-protein kinase-like domain (InterPro-IPR017442), Protein kinase-like domain (InterPro-IPR011009), Serine/threonine-protein kinase, active site (InterPro-IPR008271); BEST Arabidopsis thaliana protein match is- Protein kinase superf [...] (344 aa)
   
      0.452
MKK8
Mitogen-activated protein kinase kinase 8; Member of MAP Kinase Kinase; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily (293 aa)
   
      0.448
VPS28-1
Vacuolar protein sorting-associated protein 28 homolog 1; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Mediates the association to the ESCRT-0 complex (By similarity); Belongs to the VPS28 family (209 aa)
       
 
  0.420
VPS28-2
Vacuolar protein sorting-associated protein VPS28 family protein; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Mediates the association to the ESCRT-0 complex (By similarity); Belongs to the VPS28 family (210 aa)
       
 
  0.420
GAF1
Polymerase/histidinol phosphatase-like; Its function is described as tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; Involved in tRNA processing; Located in cellular_component unknown; Expressed in trichome; Contains the following InterPro domains- Polymerase/histidinol phosphatase-like (InterPro-IPR016195), RNase P subunit p30 (InterPro-IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species- Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source- NCBI BLink) (705 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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