STRINGSTRING
RKL1 protein (Arabidopsis thaliana) - STRING interaction network
"RKL1" - Receptor-like kinase 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RKL1Receptor-like kinase 1 (655 aa)    
Predicted Functional Partners:
AT5G05190
Uncharacterized protein (615 aa)
       
      0.679
AT3G27210
Uncharacterized protein (234 aa)
       
      0.679
AT3G17950
Uncharacterized protein (211 aa)
       
      0.679
AT2G37480
Uncharacterized protein (194 aa)
       
      0.679
FLA2
FASCICLIN-like arabinogalactan 2; May be a cell surface adhesion protein (403 aa)
     
   
  0.494
GH9B7
Endoglucanase 10 (525 aa)
     
        0.454
AT3G56370
Leucine-rich repeat protein kinase-like protein (964 aa)
     
   
0.454
LYM1
Lysm domain GPI-anchored protein 1 precursor; Required as a cell surface receptor for peptidoglycan (PGN) elicitor signaling leading to innate immunity. Plays an essential role in detecting PGNs and restricting bacterial growth (of Pseudomonas syringae pv. tomato DC3000 for example) (416 aa)
     
   
  0.452
AT5G14970
Uncharacterized protein (355 aa)
           
  0.449
PG2
Polygalacturonase 2; Involved in cell size determination. May serve as a chaperone for expansins through the secretory pathway (626 aa)
     
        0.429
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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