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AT1G48550 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48550" - Vacuolar protein sorting-associated protein 26 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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experimentally determined
Predicted Interactions
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textmining
co-expression
protein homology
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AT1G48550Vacuolar protein sorting-associated protein 26; Its function is described as molecular_function unknown; Involved in intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; Located in retromer complex; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Vacuolar protein sorting-associated protein 26 (InterPro-IPR005377); Has 299 Blast hits to 296 proteins in 113 species- Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 26; Plants - 78; Viruses - 0; Other Eukaryotes - 70 (source- NCBI BLink) (327 aa)    
Predicted Functional Partners:
MAG1
Calcineurin-like metallo-phosphoesterase superfamily protein; Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Required for the auxin- carrier protein PIN2 sorting to the lytic vacuolar pathway and the PIN1 recycling to the plasma membrane. Also involved in the efficient sorting of seed storage proteins globulin 12S and albumin 2S. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane (190 aa)
     
 
  0.993
VPS35A
Vacuolar protein sorting-associated protein 35A; Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Also involved in the efficient sorting of seed storage proteins (Probable). Binds alone to endosomal membranes and is required for recruitment of VPS26 and VPS29 to membrane. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane (787 aa)
     
   
  0.973
VTI13
Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members- VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated (195 aa)
           
  0.951
AT1G55830
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF812 (InterPro-IPR008530) (493 aa)
       
 
  0.910
AT5G06120
ARM repeat superfamily protein; Its function is described as protein transporter activity, binding; Involved in intracellular protein transport, protein import into nucleus, docking; Located in nucleus, nuclear pore, cytoplasm; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Importin-beta, N-terminal (InterPro-IPR001494), Armadillo-type fold (InterPro-IPR016024); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G04490.1); Has 572 Blast hits to 534 proteins in 126 species- Archae - 0; Bacteria - 0; Metazoa [...] (1066 aa)
       
      0.852
AT4G32560
Uncharacterized protein At4g32560; Paramyosin-related; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (306 aa)
       
 
  0.720
VPS26B
Vacuolar protein sorting-associated protein 26B; Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane (303 aa)
     
   
  0.697
AT1G50120
Uncharacterized protein At1g50120; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Rgp1 (InterPro-IPR014848), Immunoglobulin E-set (InterPro-IPR014756); Has 144 Blast hits to 140 proteins in 61 species- Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source- NCBI BLink) (532 aa)
           
  0.670
AT2G39445
Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- PIG-P (InterPro-IPR013717), Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (InterPro-IPR016542); BEST Arabidopsis thaliana protein match is- Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (TAIR-AT1G61280.1); Has 338 Blast hits to 338 proteins in 148 species- Archae - 0; Bacteria - 0; Metazoa - 138; F [...] (181 aa)
     
   
  0.667
AT1G61280
Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis; Belongs to the PIGP family (137 aa)
     
   
  0.667
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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