STRINGSTRING
AT1G48660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48660" - Auxin-responsive GH3-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48660Auxin-responsive GH3-like protein (573 aa)    
Predicted Functional Partners:
AT3G26742
Uncharacterized protein (51 aa)
           
  0.736
AT1G77960
Uncharacterized protein (420 aa)
           
  0.736
AT5G19340
Uncharacterized protein (263 aa)
           
  0.731
AT4G31450
RING/U-box superfamily protein (497 aa)
           
  0.731
AT4G26630
DEK domain-containing chromatin associated protein (763 aa)
           
  0.731
BSK6
Brassinosteroid-signaling kinase 6 (490 aa)
           
  0.731
AT1G77780
Glycosyl hydrolase family 17 protein (363 aa)
           
  0.710
AT4G39680
SAP domain-containing protein (633 aa)
           
  0.707
AT5G38540
Jacalin lectin family protein (495 aa)
           
  0.678
LBD26
LOB domain-containing protein 26 (153 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]