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AT1G48690 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48690" - Auxin-responsive GH3 family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48690Auxin-responsive GH3 family protein (190 aa)    
Predicted Functional Partners:
AT5G03310
SAUR-like auxin-responsive protein (114 aa)
           
  0.635
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (203 aa)
     
   
  0.611
AT5G49950
alpha/beta-Hydrolases superfamily protein (537 aa)
           
  0.607
AT5G23360
GEM-like protein 7 (210 aa)
           
  0.607
MEE55
Maternal effect embryo arrest 55 (394 aa)
           
  0.607
AT3G54510
Early-responsive to dehydration stress protein (ERD4); Acts as an osmosensitive calcium-permeable cation channel (712 aa)
           
  0.607
EDA4
Xylogen like protein 6 (200 aa)
     
   
  0.575
AT3G58550
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (177 aa)
     
   
  0.567
AT5G67340
ARM repeat superfamily protein; Functions as an E3 ubiquitin ligase (707 aa)
           
  0.558
MEE38
Maternal effect embryo arrest 38 (295 aa)
           
  0.509
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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