• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G48820 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48820" - Terpenoid cyclases/Protein prenyltransferases superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AT1G48820Terpenoid cyclases/Protein prenyltransferases superfamily protein; Its function is described as lyase activity, magnesium ion binding; Involved in metabolic process; Expressed in leaf whorl, flower, seed; Expressed during F mature embryo stage, petal differentiation and expansion stage; Contains the following InterPro domains- Terpene synthase, metal-binding domain (InterPro-IPR005630), Terpenoid synthase (InterPro-IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro-IPR008930), Terpene synthase-like (InterPro-IPR001906); BEST Arabidopsis thaliana protei [...] (561 aa)
 
Sorry, there are no predicted associations at the current settings.
 
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]