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AT1G48830 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48830" - 40S ribosomal protein S7-1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G4883040S ribosomal protein S7-1 (191 aa)    
Predicted Functional Partners:
AT5G52650
40S ribosomal protein S10-3 (179 aa)
     
  0.999
AT4G16720
60S ribosomal protein L15-1 (204 aa)
     
  0.999
RPS6A
Ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (250 aa)
     
  0.999
AT3G04840
Ribosomal protein S3Ae (262 aa)
     
  0.999
RPS11-BETA
Ribosomal protein S11-beta (159 aa)
     
  0.999
AT5G61170
40S ribosomal protein S19-3 (143 aa)
     
  0.999
AT3G53890
Ribosomal protein S21e (82 aa)
     
  0.999
EMB3010
Embryo defective 3010; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
     
  0.999
rps15ab
Ribosomal protein S15A B (129 aa)
     
  0.999
emb2386
Embryo defective 2386 (214 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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