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AT1G48970 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48970" - NagB/RpiA/CoA transferase-like superfamily protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48970NagB/RpiA/CoA transferase-like superfamily protein (666 aa)    
Predicted Functional Partners:
AT5G19485
Transferases;nucleotidyltransferases (456 aa)
     
  0.997
AT3G07300
Translation initiation factor eIF-2B beta subunit (409 aa)
     
0.996
AT4G18300
Trimeric LpxA-like enzyme (709 aa)
     
  0.996
AT3G02270
Trimeric LpxA-like enzyme (676 aa)
     
  0.996
AT2G34970
Trimeric LpxA-like enzyme (730 aa)
     
  0.996
At5g05470
Translation initiation factor eIF-2 alpha subunit (344 aa)
     
  0.995
AT2G40290
Eukaryotic translation initiation factor 2 subunit 1 (344 aa)
     
  0.995
EMB1401
Protein synthesis initiation factor eIF2 beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by e [...] (268 aa)
     
  0.993
AT5G01940
Translation initiation factor eIF-2 beta subunit (231 aa)
     
  0.993
AT3G07920
Translation initiation factor IF2/IF5 (164 aa)
     
  0.993
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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