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AT1G48980 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48980" - 2-oxoglutarate in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G489802-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (331 aa)    
Predicted Functional Partners:
AT3G50880
DNA-3-methyladenine glycosylase II (273 aa)
   
   
  0.514
AT1G75230
DNA-3-methyladenine glycosylase II (394 aa)
   
   
  0.514
OGG1
8-oxoguanine-DNA glycosylase 1; Involved in repair of DNA damaged by oxidation by incising DNA at 8-oxoG residues. Excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine (Fapy) from damaged DNA. Has a beta-lyase activity that nicks DNA 3’ to the lesion (365 aa)
   
   
  0.514
AT1G19480
DNA glycosylase superfamily protein (382 aa)
   
   
  0.514
ELO3
ELONGATA 3; Histone acetyltransferase component of the large multiprotein complex Elongator that is involved in the regulation of transcription initiation and elongation (PubMed-20080602). May also have a methyltransferase activity (PubMed-20080602). Promotes organs development by modulating cell division rate (PubMed-20080602). Required for auxin distribution or signaling (PubMed-20080602). Required for meristem cell cycle activation at the time of germination (PubMed-23969312). Probably required for DNA replication-coupled histone acetylation (PubMed-22026817). Involved in tRNA wobbl [...] (565 aa)
           
  0.418
PXMT1
S-adenosylmethionine-dependent methyltransferase domain-containing protein (353 aa)
     
        0.407
ROL5
Repressor of lrx1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (358 aa)
           
  0.404
AT1G76170
2-thiocytidine tRNA biosynthesis protein, TtcA; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (332 aa)
           
  0.404
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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