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AT1G49010 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49010" - Duplicated homeodomain-like superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G49010Duplicated homeodomain-like superfamily protein; Contains the following InterPro domains- Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro-IPR015609), SANT, eukarya (InterPro-IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro-IPR006447), SANT, DNA-binding (InterPro-IPR001005), Myb, DNA-binding (InterPro-IPR014778), Homeodomain-like (InterPro-IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro-IPR017930); BEST Arabidopsis thaliana protein match is- Duplicated homeodomain-like superfamily protein (TAIR-AT5G08520.1); Has 2158 Blast hits t [...] (314 aa)    
Predicted Functional Partners:
AT3G24860
Uncharacterized protein At3g24860/K7P8_14; Homeodomain-like superfamily protein; Its function is described as sequence-specific DNA binding transcription factor activity; Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- SANT, DNA-binding (InterPro-IPR001005), MYB-like (InterPro-IPR017877); BEST Arabidopsis thaliana protein match is- Alcohol dehydrogenase transcription factor Myb/SANT-like family protein (TAIR-AT2G44730.1); Has 901 Blast hits to 752 proteins in 148 species- Archae - 0; Bacteria - 32; Metazoa - 105; Fungi - 44; Plan [...] (310 aa)
           
  0.952
AT3G52250
Duplicated homeodomain-like superfamily protein; Encodes a protein with a putative role in mRNA splicing (1656 aa)
     
   
  0.899
AT4G01280
Homeodomain-like superfamily protein; Probable transcription factor (303 aa)
           
  0.820
RL3
Protein RADIALIS-like 3; Probable transcription factor (58 aa)
           
  0.777
AT4G37180
Homeodomain-like superfamily protein; Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5’-GTAGATTCCT-3’ of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5’-AAGAATCTTT-3’ found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions (363 aa)
           
  0.733
AT4G16660
Heat shock protein 70 (Hsp 70) family protein; Its function is described as ATP binding; Located in plasma membrane, chloroplast; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Heat shock protein 70, conserved site (InterPro-IPR018181), Heat shock protein Hsp70 (InterPro-IPR001023), Heat shock protein 70 (InterPro-IPR013126); BEST Arabidopsis thaliana protein match is- heat shock protein 70 (Hsp 70) family protein (TAIR-AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazo [...] (867 aa)
     
 
  0.577
NAC014
NAC domain-containing protein 14; Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (652 aa)
     
   
  0.560
LZF1
Light-regulated zinc finger protein 1; Acts as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21. Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins. Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments. Regulates the expression of genes responsive to light hormone signals which [...] (319 aa)
           
  0.548
AT2G02160
CCCH-type zinc finger family protein; Its function is described as zinc ion binding, nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, CCCH-type (InterPro-IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species- Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source- NCBI BLink) (669 aa)
           
  0.539
RACK1C_AT
Receptor for activated C kinase 1C; Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily (326 aa)
     
 
  0.526
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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