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RABG3E protein (Arabidopsis thaliana) - STRING interaction network
"RABG3E" - RAB GTPase homolog G3E in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABG3ERAB GTPase homolog G3E; Intracellular vesicle trafficking and protein transport. May play a role in adaptation to stress by recylcing macromolecules in specific cellular compartments (206 aa)    
Predicted Functional Partners:
AT2G28390
SAND family protein (607 aa)
     
 
  0.947
GDI
RAB GDP-dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (445 aa)
     
 
  0.926
GDI2
RAB GDP DISSOCIATION INHIBITOR 2; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (444 aa)
     
 
  0.895
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor 1; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (445 aa)
     
 
  0.895
VAMP713
Vesicle-associated membrane protein 713; Involved in the targeting and/or fusion of transport vesicles to their target membrane (221 aa)
     
 
  0.831
VAMP711
Vesicle-associated membrane protein 711; Involved in the targeting and/or fusion of transport vesicles to their target membrane (219 aa)
     
 
  0.801
VAMP714
Vesicle-associated membrane protein 714; Involved in the targeting and/or fusion of transport vesicles to their target membrane (221 aa)
     
 
  0.796
VAMP728
Member of VAMP72 Gene Family (124 aa)
     
 
  0.794
VAMP712
Vesicle-associated membrane protein 712; Involved in the targeting and/or fusion of transport vesicles to their target membrane (219 aa)
     
 
  0.791
ARA6
Ras-related small GTP-binding family protein; Endosomal protein probably involved in endocytosis. Probably not involved in vacuolar trafficking (202 aa)
   
 
0.758
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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