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AT1G49475 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49475" - B3 domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G49475B3 domain-containing protein (190 aa)    
Predicted Functional Partners:
AT5G56240
Uncharacterized protein (987 aa)
           
  0.955
AT3G58770
Uncharacterized protein (771 aa)
           
  0.922
HAP8
HAPLESS 8 (811 aa)
           
  0.866
RTV1
Related to vernalization1 1; Involved in the regulation of vernalization (By similarity). Binds to DNA in vitro in a non-sequence-specific manner. XLG2 promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo and thus leads to the activation of floral integrator genes (226 aa)
           
  0.808
RING1A
RING 1A (525 aa)
     
   
  0.658
DRIP2
DREB2A-interacting protein 2; E3 ubiquitin-protein ligase that acts as a negative regulator of the response to water stress. Mediates ubiquitination and subsequent proteasomal degradation of the drought-induced transcriptional activator DREB2A. Functionally redundant with DRIP1 (420 aa)
     
   
  0.613
RING1B
RING 1B; Putative E3 ubiquitin-protein ligase that mediates monoubiquitination of ’Lys-119’ of histone H2A (H2AK119ub), thereby playing a central role in histone code and gene regulation (468 aa)
           
  0.604
ROP9
RHO-related protein from plants 9; Acts as a negative regulator of abscisic acid (ABA) responses (209 aa)
     
        0.456
HSD6
Hydroxysteroid dehydrogenase 6 (342 aa)
     
        0.438
NF-YB6
Nuclear factor Y, subunit B6; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. Plays a role in the regulation of the embryogenesis. Involved in the abscisic acid (ABA) signaling pathway (234 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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