STRINGSTRING
RTV1 protein (Arabidopsis thaliana) - STRING interaction network
"RTV1" - Related to vernalization1 1 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTV1Related to vernalization1 1; Involved in the regulation of vernalization (By similarity). Binds to DNA in vitro in a non-sequence-specific manner. XLG2 promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo and thus leads to the activation of floral integrator genes (226 aa)    
Predicted Functional Partners:
XLG2
Extra-large GTP-binding protein 2; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (By similarity). Binds GTP with specificity. Plays a role in the root morphogenesis by regulation of the cell proliferation. Acts as a positive regulator in resistance to pathogen that triggers the salicylic acid (SA) pathway. Promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo leading to the activation of floral integrator genes (861 aa)
       
 
  0.908
ITN1
INCREASED TOLERANCE TO NACL (590 aa)
       
 
  0.894
AT3G18960
AP2/B3 domain-containing transcription factor (209 aa)
     
   
  0.816
AT4G01580
AP2/B3 domain-containing protein (190 aa)
           
  0.808
AT1G49475
B3 domain-containing protein (190 aa)
           
  0.808
AT5G56240
Uncharacterized protein (987 aa)
           
  0.738
AT3G58770
Uncharacterized protein (771 aa)
           
  0.731
AT2G24680
B3 domain-containing protein REM12 (471 aa)
           
  0.678
AT1G20600
AP2/B3 domain-containing protein (237 aa)
           
  0.678
AT4G31640
B3 domain-containing protein REM5 (352 aa)
           
  0.677
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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