Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AT1G49590 | AT3G55930 | AT1G49590.1 | AT3G55930.1 | C2H2 and C2HC zinc finger protein | Pre-mRNA-splicing factor 3 | 0.972 |
| AT1G49590 | AT5G44500 | AT1G49590.1 | AT5G44500.1 | C2H2 and C2HC zinc finger protein | Small nuclear ribonucleoprotein B and B’ | 0.955 |
| AT1G49590 | AT5G64270 | AT1G49590.1 | AT5G64270.1 | C2H2 and C2HC zinc finger protein | Putative splicing factor | 0.955 |
| AT1G49590 | ATO | AT1G49590.1 | AT5G06160.1 | C2H2 and C2HC zinc finger protein | ATROPOS | 0.955 |
| AT1G49590 | NRPB1 | AT1G49590.1 | AT4G35800.1 | C2H2 and C2HC zinc finger protein | RNA polymerase II large subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB1 is part of the core element with the central large cleft, the cl [...] | 0.953 |
| AT1G49590 | SR45 | AT1G49590.1 | AT1G16610.3 | C2H2 and C2HC zinc finger protein | Arginine/serine-rich 45; Involved in 5’ and 3’ splicing site selection of introns, and may bridge the 5’ and 3’ components of the spliceosome. Isoform 1 is required during flower petal development and isoform 2 is involved in root growth. Regulates negatively glucose and abscisic acid (ABA) signaling during early seedling development. Involved in the RNA-directed DNA methylation pathway (PubMed-22274613) | 0.958 |
| AT1G49590 | U1-70K | AT1G49590.1 | AT3G50670.1 | C2H2 and C2HC zinc finger protein | Encodes U1 snRNP 70K; Mediates the splicing of pre-mRNA by binding to the loop I region of U1-snRNA | 0.978 |
| AT1G49590 | U2AF35B | AT1G49590.1 | AT5G42820.1 | C2H2 and C2HC zinc finger protein | Splicing factor U2af small subunit B; Necessary for the splicing of pre-mRNA (By similarity). Probably active at the 3’ splice sites | 0.953 |
| AT1G49590 | U2B' | AT1G49590.1 | AT2G30260.1 | C2H2 and C2HC zinc finger protein | U2 small nuclear ribonucleoprotein B; Involved in nuclear pre-mRNA splicing | 0.981 |
| AT1G49590 | emb1220 | AT1G49590.1 | AT1G60170.1 | C2H2 and C2HC zinc finger protein | Embryo defective 1220 | 0.952 |
| AT3G55930 | AT1G49590 | AT3G55930.1 | AT1G49590.1 | Pre-mRNA-splicing factor 3 | C2H2 and C2HC zinc finger protein | 0.972 |
| AT3G55930 | AT5G44500 | AT3G55930.1 | AT5G44500.1 | Pre-mRNA-splicing factor 3 | Small nuclear ribonucleoprotein B and B’ | 0.993 |
| AT3G55930 | AT5G64270 | AT3G55930.1 | AT5G64270.1 | Pre-mRNA-splicing factor 3 | Putative splicing factor | 0.992 |
| AT3G55930 | ATO | AT3G55930.1 | AT5G06160.1 | Pre-mRNA-splicing factor 3 | ATROPOS | 0.992 |
| AT3G55930 | NRPB1 | AT3G55930.1 | AT4G35800.1 | Pre-mRNA-splicing factor 3 | RNA polymerase II large subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB1 is part of the core element with the central large cleft, the cl [...] | 0.904 |
| AT3G55930 | SR45 | AT3G55930.1 | AT1G16610.3 | Pre-mRNA-splicing factor 3 | Arginine/serine-rich 45; Involved in 5’ and 3’ splicing site selection of introns, and may bridge the 5’ and 3’ components of the spliceosome. Isoform 1 is required during flower petal development and isoform 2 is involved in root growth. Regulates negatively glucose and abscisic acid (ABA) signaling during early seedling development. Involved in the RNA-directed DNA methylation pathway (PubMed-22274613) | 0.968 |
| AT3G55930 | U1-70K | AT3G55930.1 | AT3G50670.1 | Pre-mRNA-splicing factor 3 | Encodes U1 snRNP 70K; Mediates the splicing of pre-mRNA by binding to the loop I region of U1-snRNA | 0.970 |
| AT3G55930 | U2AF35B | AT3G55930.1 | AT5G42820.1 | Pre-mRNA-splicing factor 3 | Splicing factor U2af small subunit B; Necessary for the splicing of pre-mRNA (By similarity). Probably active at the 3’ splice sites | 0.967 |
| AT3G55930 | U2B' | AT3G55930.1 | AT2G30260.1 | Pre-mRNA-splicing factor 3 | U2 small nuclear ribonucleoprotein B; Involved in nuclear pre-mRNA splicing | 0.948 |
| AT3G55930 | emb1220 | AT3G55930.1 | AT1G60170.1 | Pre-mRNA-splicing factor 3 | Embryo defective 1220 | 0.996 |
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