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AT1G49640 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49640" - alpha/beta-Hydrolases superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
AT1G49640alpha/beta-Hydrolases superfamily protein; Carboxylesterase acting on esters with varying acyl chain length (315 aa)    
Predicted Functional Partners:
SDG20
Histone-lysine N-methyltransferase SUVR3; Histone methyltransferase (354 aa)
           
  0.473
PUM23
Pumilio homolog 23; Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3’ UTR of target mRNA transcripts (753 aa)
           
  0.470
BEN1
NAD(P)-binding Rossmann-fold superfamily protein; Element of the brassinosteroid metabolic pathway that regulates typhasterol, castasterone and brassinolide levels. Involved in the control of organ elongation (364 aa)
     
   
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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