STRINGSTRING
AT1G49680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49680" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G49680Uncharacterized protein (99 aa)    
Predicted Functional Partners:
CYP79A4P
A cytochrome P450 pseudogene (155 aa)
     
        0.438
AT4G28870
Uncharacterized protein (99 aa)
     
     
0.438
AT4G03950
Nucleotide/sugar transporter family protein (277 aa)
     
        0.436
AT3G30230
Myosin heavy chain-related (527 aa)
     
        0.436
AT5G34870
Zinc knuckle (CCHC-type) family protein (516 aa)
     
        0.435
AT2G18610
Uncharacterized protein (86 aa)
     
        0.435
AT1G51172
Uncharacterized protein (681 aa)
     
        0.435
AT1G47265
Uncharacterized protein (76 aa)
     
        0.427
AT5G36228
Nucleic acid binding;zinc ion binding (361 aa)
     
        0.409
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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