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RGE1 protein (Arabidopsis thaliana) - STRING interaction network
"RGE1" - RETARDED GROWTH OF EMBRYO 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
RGE1RETARDED GROWTH OF EMBRYO 1; Controls embryo growth (308 aa)    
Predicted Functional Partners:
ALE1
ABNORMAL LEAF-SHAPE 1; Serine protease required for epidermal surface formation in embryos and juvenile plants (832 aa)
     
   
  0.887
ICE1
Transcription factor ICE1; Transcriptional activator that regulates the cold- induced transcription of CBF/DREB1 genes. Binds specifically to the MYC recognition sites (5’-CANNTG-3’) found in the CBF3/DREB1A promoter. Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA (494 aa)
     
 
  0.876
AT5G62300.1
40S ribosomal protein S20-1 (124 aa)
           
  0.864
AT5G03820
GDSL esterase/lipase (354 aa)
     
   
  0.847
AT4G33600
Uncharacterized protein (470 aa)
     
   
  0.845
SUC5
Sucrose transport protein SUC5; Responsible in a heterologous system for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport biotin, and probably maltose at a lesser rate. In planta, the role of SUC5 for the transport of sucrose seems to be negligible. Plays a role in the nutrition of the filial tissues during early seed development and is probably involved in the import of biotin into the endosperm and the embryo epidermis (512 aa)
     
   
  0.765
AT1G71250
GDSL esterase/lipase (374 aa)
     
   
  0.760
GSO1
GASSHO1; Together with GSO2, receptor-like serine/threonine- kinase required during the development of the epidermal surface in embryos and cotyledons (1249 aa)
           
  0.746
AT3G06890
Uncharacterized protein (128 aa)
           
  0.739
AT2G22030
F-box/kelch-repeat protein (383 aa)
     
   
  0.735
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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