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AT1G49920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49920" - Uncharacterized protein T18C15_1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AT1G49920Uncharacterized protein T18C15_1; MuDR family transposase; Its function is described as zinc ion binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- MULE transposase, conserved domain (InterPro-IPR018289), Zinc finger, PMZ-type (InterPro-IPR006564), Zinc finger, SWIM-type (InterPro-IPR007527), Transposase, MuDR, plant (InterPro-IPR004332); BEST Arabidopsis thaliana protein match is- MuDR family transposase (TAIR-AT1G64260.1); Has [...] (785 aa)
 
Sorry, there are no predicted associations at the current settings.
 
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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