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STRINGSTRING
AT1G50000 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G50000" - Methyltransferases in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G50000Methyltransferases; Its function is described as methyltransferase activity; Involved in rRNA processing; Located in chloroplast; Expressed in 18 plant structures; Expressed during 9 growth stages; Contains the following InterPro domains- Pseudouridine synthase/archaeosine transglycosylase-like (InterPro-IPR015947), Ribosomal RNA small subunit methyltransferase E (InterPro-IPR006700); Has 5958 Blast hits to 5958 proteins in 2191 species- Archae - 0; Bacteria - 4231; Metazoa - 2; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1691 (source- NCBI BLink) (296 aa)    
Predicted Functional Partners:
AT1G50020
Putative tubulin alpha-6 chain; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast thylakoid membrane, chloroplast; Expressed in 24 plant structures; Expressed during 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (209 aa)
           
  0.953
AT5G47070
Probable serine/threonine-protein kinase PBL19; May be involved in plant defense signaling (410 aa)
           
  0.908
BGLU14
Beta glucosidase 14 (BGLU14); Its function is described as cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; Involved in pollen tube growth; Located in plant-type cell wall; Expressed in stem, male gametophyte, pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- Glycoside hydrolase, family 1 (InterPro-IPR001360), Glycoside hydrolase, family 1, active site (InterPro-IPR018120), Glycoside hydrolase, catalytic core (InterPro-IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro-IPR013781); [...] (489 aa)
           
  0.869
BGLU15
Beta-glucosidase 15; Beta-glucosidase involved in the rapid degradation of flavonol 3-O-beta-glucoside-7-O-alpha-rhamnosides during abiotic stress recovery. No activity with quercetin 3-O-alpha-rhamnoside, quercetin 3-O-beta-galactoside and rutin (506 aa)
           
  0.833
AT4G08790
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; Its function is described as hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrilase activity; Involved in response to cadmium ion, nitrogen compound metabolic process; Expressed in 21 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro-IPR003010); BEST Arabidopsis thaliana protein match is- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family prot [...] (307 aa)
         
  0.753
AT3G44820
BTB/POZ domain-containing protein At3g44820; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (651 aa)
           
  0.735
AT1G11950
Transcription factor jumonji (jmjC) domain-containing protein; Contains the following InterPro domains- Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro-IPR003347), Transcription factor jumonji (InterPro-IPR013129); BEST Arabidopsis thaliana protein match is- transcription factor jumonji (jmjC) domain-containing protein (TAIR-AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (875 aa)
           
  0.712
AT2G42780
Transcription elongation factor B polypeptide; Its function is described as molecular_function unknown; Involved in regulation of transcription; Located in integral to membrane, nucleus; Expressed in 20 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- RNA polymerase II transcription factor SIII, subunit A (InterPro-IPR010684); Has 187 Blast hits to 186 proteins in 77 species- Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source- NCBI BLink) (293 aa)
           
  0.699
MAP3KA
MEK kinase (MAP3Ka); Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily (609 aa)
           
  0.694
AT1G45110
Tetrapyrrole (Corrin/Porphyrin) Methylases; Its function is described as methyltransferase activity; Involved in metabolic process; Expressed in 18 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Uncharacterised protein family UPF0011, conserved site (InterPro-IPR018063), Tetrapyrrole methylase (InterPro-IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro-IPR014777), Uncharacterised protein family UPF0011 (InterPro-IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species- Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; P [...] (343 aa)
   
   
  0.692
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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