STRINGSTRING
AT1G50290 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G50290" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G50290Uncharacterized protein (134 aa)    
Predicted Functional Partners:
AT2G44240
Uncharacterized protein (402 aa)
           
  0.958
AT2G41650
Uncharacterized protein (66 aa)
           
  0.956
AT2G22080
Uncharacterized protein (177 aa)
           
  0.911
AT2G19310
HSP20-like chaperone (162 aa)
           
  0.867
AT1G64360
Uncharacterized protein (85 aa)
           
  0.774
AT5G18040
Uncharacterized protein (252 aa)
           
  0.670
MMT
Methionine S-methyltransferase; Catalyzes the S-methylmethionine (SMM) biosynthesis from adenosyl-L-homocysteine (AdoMet) and methionine. SMM biosynthesis (by MMT1) and degradation (by HMT-1, HMT-2 and HMT-3) constitute the SMM cycle in plants, which is probably required to achieve short term control of AdoMet level. Also able to catalyze the selenium-methylmethionine (SeMM) from AdoMet and selenium- methionine (SeMet). May play a role in phoem sulfur transport; such function is however not essential (1071 aa)
           
  0.554
ZAT7
C2H2 and C2HC zinc finger-containing protein; Probable transcription factor involved in oxidative stress response (168 aa)
           
  0.472
TRX2
Thioredoxin 2; Thiol-disulfide oxidoreductase probably involved in the redox regulation of a number of cytosolic enzymes. Possesses insulin disulfide bonds reducing activity (133 aa)
           
  0.449
AT2G35380
Peroxidase 20; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue (336 aa)
           
  0.426
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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