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SCL3 protein (Arabidopsis thaliana) - STRING interaction network
"SCL3" - Encodes a scarecrow-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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SCL3Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay); Belongs to the GRAS family (482 aa)    
Predicted Functional Partners:
NUC
Zinc finger protein NUTCRACKER; Transcription factor that binds to the DNA sequence 5’- CTTTTGTCC-3’. Regulates photoperiodic flowering by modulating sugar transport and metabolism. Regulates SUS1 and SUS4 (466 aa)
       
 
  0.823
MGP
C2H2 and C2HC zinc fingers superfamily protein; MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning- SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations (506 aa)
       
 
  0.819
RGA1
GRAS family transcription factor family protein; Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PI [...] (587 aa)
       
 
0.770
GAI
GRAS family transcription factor family protein; Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly deg [...] (533 aa)
       
 
0.767
RGL1
DELLA protein RGL1; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA- inducible genes. Has overlapping but distinct roles in GA signaling compared to RGA and GAI. Regulates the floral development. May also participate in seed germination and in ovule and anther development. Its activity is probably regulated by other phytohormones such as auxin and ethylene (511 aa)
       
 
0.756
IDD4
Protein indeterminate-domain 4, chloroplastic; Transcription factor that may act a transcriptional activator of nuclear-encoded photosynthetic gene expression (516 aa)
       
 
  0.727
JKD
C2H2-like zinc finger protein; JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All o [...] (503 aa)
       
 
  0.695
IDD5
Protein indeterminate-domain 5, chloroplastic; Transcription factor acting as a positive regulator of the starch synthase SS4. Controls chloroplast development and starch granule formation (602 aa)
       
 
  0.694
AT5G67411
Putative scarecrow-like protein 16; Probable transcription factor involved in plant development (202 aa)
           
  0.652
NSP1
Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation; Belongs to the jacalin lectin family (470 aa)
           
  0.626
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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