STRINGSTRING
TCP8 protein (Arabidopsis thaliana) - STRING interaction network
"TCP8" - TCP family transcription factor in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP8TCP family transcription factor; Can specifically bind site II elements in the promoter region of PP438/PNM1 (401 aa)    
Predicted Functional Partners:
PNM1
Pentatricopeptide repeat-containing protein PNM1, mitochondrial; RNA-binding protein that functions in both mitochondrion and nucleus. In mitochondrion, it is associated with polysomes and may play a role in translation. Required during embryogenesis. In nucleus, might be involved in the regulation of its own gene expression; Belongs to the PPR family. P subfamily (521 aa)
       
 
  0.953
PTF1
Plastid transcription factor 1; Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary- specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Binds to the 3’-ACC-5’ repeats in the light-responsive promoter (LRP) of psbD, and activates its transcription. Participates in ovule develpment (355 aa)
       
 
  0.870
SRFR1
Tetratricopeptide repeat (TPR)-like superfamily protein; Negative regulator of effector-triggered immunity associated with the EDS1 resistance pathway. May localize its interactors to a microsomal membrane. May therefore negatively regulate RPS4 and SNC1 translocation to the nucleus. Contributes to the regulation of RPS2 and RPS4 protein levels and negatively regulates SNC1 stability (1052 aa)
       
 
  0.869
TCP3
Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation (391 aa)
       
 
  0.844
TCP5
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5; Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary- specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (360 aa)
       
 
  0.836
TCP15
TCP family transcription factor ; Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Transcription factor, TCP (InterPro-IPR005333), Transcription factor TCP subgroup (InterPro-IPR017887); BEST Arabidopsis thaliana protein match is- TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR-AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species- Archae - 0; Bacteria - 6; Me [...] (325 aa)
       
 
0.804
WRKY28
Probable WRKY transcription factor 28; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (318 aa)
       
 
  0.802
SARD1
Calmodulin binding protein-like; Transcription activator that binds DNA in a sequence- specific manner, 5’-GAAATTTTGG-3’, to promote the expression of target genes. Recruited to the promoter of ICS1 and other defense-related genes (e.g. PR1 and SID2) in response to both biotic (e.g. Pseudomonas syringae pv. maculicola ES4326) and abiotic stresses (e.g. UV-B), thus triggering slow defense responses by stimulating salicylic acid (SA) biosynthesis. Required for basal and systemic acquired resistance to P. syringae pv. maculicola and Hyaloperonospora arabidopsidis; Belongs to the plant ACB [...] (451 aa)
       
 
  0.797
TCP11
TCP family transcription factor; Transcription factor involved in the regulation of the circadian clock. Acts as a repressor of CCA1 by binding to its promoter. No binding to the LHY promoter (239 aa)
       
 
0.790
AT5G23280
TCP family transcription factor ; Contains the following InterPro domains- Transcription factor, TCP (InterPro-IPR005333), Transcription factor TCP subgroup (InterPro-IPR017887); BEST Arabidopsis thaliana protein match is- TCP family transcription factor (TAIR-AT5G08330.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (250 aa)
       
 
0.785
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]