STRINGSTRING
WRKY56 protein (Arabidopsis thaliana) - STRING interaction network
"WRKY56" - Probable WRKY transcription factor 56 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
WRKY56Probable WRKY transcription factor 56; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (195 aa)    
Predicted Functional Partners:
MYB93
MYB transcription factor; Member of the R2R3 factor gene family (365 aa)
     
   
  0.658
SPCH
Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6 (364 aa)
           
  0.656
MYB53
Transcription factor-like protein; Member of the R2R3 factor gene family (310 aa)
           
  0.646
FHY3
Protein FAR-RED ELONGATED HYPOCOTYL 3; Transcription activator that recognizes and binds to the DNA consensus sequence 5’-CACGCGC-3’. Activates the expression of FHY1 and FHL involved in light responses. When associated with PHYA, protects it from being recognized and degraded by the COP1/SPA complex. Positive regulator of chlorophyll biosynthesis via the activation of HEMB1 gene expression; Belongs to the FHY3/FAR1 family (839 aa)
           
  0.639
MYB9
Myb domain protein 9; Member of the R2R3 factor gene family (336 aa)
     
   
  0.608
PUCHI
Ethylene-responsive transcription factor ERF086; Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling. Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development. Involved in the determination of floral meristem identity and suppression of bract growth. Requi [...] (348 aa)
     
   
  0.598
FUS3
Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating [...] (313 aa)
           
  0.572
MYB45
MYB transcription factor; Member of the R2R3 factor gene family (261 aa)
     
   
  0.566
FRS9
Protein FAR1-RELATED SEQUENCE 9; Putative transcription activator involved in regulating light control of development. May act as a negative regulator specific to phyB signaling; Belongs to the FHY3/FAR1 family (545 aa)
           
  0.565
AT1G68810
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Expressed in 20 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Helix-loop-helix DNA-binding domain (InterPro-IPR001092), Helix-loop-helix DNA-binding (InterPro-IPR011598); BEST Arabidopsis thaliana protein match is- basic helix-loop-helix 32 (TAIR-AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species- Arc [...] (368 aa)
           
  0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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