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SOB3 protein (Arabidopsis thaliana) - STRING interaction network
"SOB3" - SUPPRESSOR OF PHYB-4#3 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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SOB3SUPPRESSOR OF PHYB-4#3; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Acts redundantly with AHL18, AHL22 and AHL27 in the regulation of flowering and regulation of the hypocotyl elongation (PubMed-19517252). Acts redundantly with AHL27/ESC to modulate hypocotyl growth inhibition in response to light (PubMed-18088311) (302 aa)    
Predicted Functional Partners:
AT5G54930
AT hook motif-containing protein (286 aa)
     
   
  0.875
HMGA
High mobility group A; Binds A/T-rich DNA with a highly dynamic distribution into the nucleus (204 aa)
           
  0.736
HL
HAL2-like; Converts adenosine 3’-phosphate 5’-phosphosulfate (PAPS) to adenosine 5’-phosphosulfate (APS) and 3’(2’)-phosphoadenosine 5’- phosphate (PAP) to AMP. May regulate the flux of sulfur in the sulfur-activation pathway by converting PAPS to APS (By similarity). Prevents both the toxicity of PAP on RNA processing enzymes as well as the product inhibition by PAP of sulfate conjugation (373 aa)
           
  0.731
AT4G37240
Uncharacterized protein (168 aa)
           
  0.670
BRG3
BOI-related gene 3; Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins (335 aa)
           
  0.635
PHYB
Phytochrome B; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduc [...] (1172 aa)
       
 
  0.634
ESC
ESCAROLA; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (PubMed-17971039, PubMed-19517252). Negatively regulates plant innate immunity (PTI) to pathogens through the down-regulation of the PAMP-triggered FRK1 expression (PubMed-20738724). Acts redundantly with AHL18, AHL22 and AHL29 in the regulation of flowering and regulation of the hypocotyl elongation (PubMed-19517252). Acts as a chromatin remodeling factor that negatively regulates the leaf senescence (PubMed-17971039). Acts redundantly with AHL29/SOB3 to [...] (311 aa)
     
 
0.603
AGF1
AT-hook protein of GA feedback 1; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Binds the DNA sequence GNFEI (GA-negative feedback element I) in the GA3OX1 promoter. Binding to GNFEI sequence is required for GA-negative feedback regulation of GA3OX1 (299 aa)
       
 
0.575
IAMT1
IAA carboxylmethyltransferase 1; Catalyzes the methylation of the free carboxyl end of the plant hormone indole-3-acetic acid (IAA). Converts IAA to IAA methyl ester (MeIAA). Regulates IAA activities by IAA methylation. Methylation of IAA plays an important role in regulating plant development and auxin homeostasis. Required for correct leaf pattern formation. MeIAA seems to be an inactive form of IAA (386 aa)
       
      0.557
AT5G52420
Uncharacterized protein (242 aa)
       
      0.557
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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