STRINGSTRING
AT2G01820 protein (Arabidopsis thaliana) - STRING interaction network
"AT2G01820" - Leucine-rich repeat protein kinase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT2G01820Leucine-rich repeat protein kinase family protein; Involved in auxin signal transduction and cell expansion and proliferation regulation; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (943 aa)    
Predicted Functional Partners:
AT1G68920
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif (486 aa)
     
   
  0.739
CDF2
Cycling DOF factor 2; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of ’CONSTANS’ expression. The stability of CDF2 is controlled by ’GIGANTEA’ and redundantly by ADO3, ADO2 and/or ADO1 (457 aa)
           
  0.699
CAM4
Encodes a calmodulin (159 aa)
     
 
  0.687
CYB-1
Probable transmembrane ascorbate ferrireductase 2; Two-heme-containing cytochrome. Catalyzes ascorbate- dependent trans-membrane ferric-chelate reduction (By similarity) (230 aa)
       
 
  0.680
AT1G14730
Cytochrome b561/ferric reductase transmembrane protein family; Two-heme-containing cytochrome. May catalyze ascorbate- dependent trans-membrane ferric-chelate reduction (By similarity) (224 aa)
       
 
  0.680
ATO
Splicing factor SF3a60 homolog; Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes; Belongs to the SF3A3 family (504 aa)
           
  0.680
GF14
14-3-3-like protein GF14 omega; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (259 aa)
       
 
  0.629
CIB5
Cryptochrome-interacting basic-helix-loop-helix 5; Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (390 aa)
           
  0.618
AT1G53100
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Its function is described as acetylglucosaminyltransferase activity; Involved in carbohydrate biosynthetic process; Located in membrane; Expressed in 7 plant structures; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Glycosyl transferase, family 14 (InterPro-IPR003406), Core-2/I-Branching enzyme (InterPro-IPR021141); BEST Arabidopsis thaliana protein match is- Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR-AT3G15 [...] (423 aa)
           
  0.596
CAM1
Encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness (175 aa)
       
 
  0.589
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (19%) [HD]