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GEK1 protein (Arabidopsis thaliana) - STRING interaction network
"GEK1" - D-aminoacyl-tRNA deacylases in Arabidopsis thaliana
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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GEK1D-aminoacyl-tRNA deacylases; Hydrolyzes D-aminoacyl-tRNA into D-amino acid and free tRNA. Broad specificity toward the amino acid, but strict specificity toward the D-isomer. Seems to be required for ethanol tolerance; Belongs to the DtdA deacylase family (317 aa)    
Predicted Functional Partners:
MYB105
Transcription factor MYB105; Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780) (330 aa)
           
  0.898
EMB2768
Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family (511 aa)
           
  0.887
AT2G33840
Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family (385 aa)
           
  0.887
AT1G28350
Nucleotidylyl transferase superfamily protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family (748 aa)
           
  0.887
OVA2
tRNA synthetase class I (I, L, M and V) family protein; Ovule abortion 2 (OVA2); Its function is described as in 6 functions; Involved in tRNA aminoacylation for protein translation, ovule development; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Aminoacyl-tRNA synthetase, class I, conserved site (InterPro-IPR001412), Plant disease resistance response protein (InterPro-IPR004265), Isoleucyl-tRNA synthetase (InterPro-IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro-IPR002301), Aminoacyl-tRNA synthetase, class 1a, [...] (1279 aa)
           
  0.493
AT4G10320
tRNA synthetase class I (I, L, M and V) family protein; Its function is described as isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; Involved in response to cadmium ion, tRNA aminoacylation for protein translation; Located in cytosol; Expressed in male gametophyte, guard cell, epidermis, cultured cell, pollen tube; Expressed during L mature pollen stage, M germinated pollen stage; Contains the following InterPro domains- Aminoacyl-tRNA synthetase, class I, conserved site (InterPro-IPR001412), Isoleucyl-tRNA synthetase [...] (1190 aa)
           
  0.493
AT3G23145
Zinc ion binding;isoleucine-tRNA ligases;ATP binding;aminoacyl-tRNA ligases;nucleotide binding; Its function is described as nucleotide binding, aminoacyl-tRNA ligase activity, isoleucine-tRNA ligase activity, zinc ion binding, ATP binding; Involved in translation, tRNA aminoacylation for protein translation; Located in cytoplasm; Contains the following InterPro domains- Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro-IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro-IPR002300), Isoleucyl-tRNA synthetase (InterPro-IPR018353); BEST Arabidopsis thaliana protei [...] (158 aa)
           
  0.493
AT5G16870
Peptidyl-tRNA hydrolase II (PTH2) family protein; Its function is described as aminoacyl-tRNA hydrolase activity; Involved in translation; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Peptidyl-tRNA hydrolase, PTH2 (InterPro-IPR002833); BEST Arabidopsis thaliana protein match is- Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR-AT3G03010.2); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- N [...] (169 aa)
           
  0.459
AT4G32900
Peptidyl-tRNA hydrolase II (PTH2) family protein; Its function is described as aminoacyl-tRNA hydrolase activity; Involved in translation; Expressed in 19 plant structures; Expressed during 10 growth stages; Contains the following InterPro domains- Peptidyl-tRNA hydrolase, PTH2 (InterPro-IPR002833); BEST Arabidopsis thaliana protein match is- Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR-AT5G16870.1); Has 933 Blast hits to 933 proteins in 345 species- Archae - 258; Bacteria - 52; Metazoa - 200; Fungi - 129; Plants - 88; Viruses - 8; Other Eukaryotes - 198 (source- NCBI BLink) (193 aa)
           
  0.459
AT3G03010
Peptidyl-tRNA hydrolase II (PTH2) family protein; Its function is described as aminoacyl-tRNA hydrolase activity; Involved in translation; Located in cellular_component unknown; Contains the following InterPro domains- Peptidyl-tRNA hydrolase, PTH2 (InterPro-IPR002833); BEST Arabidopsis thaliana protein match is- Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR-AT5G16870.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (179 aa)
           
  0.459
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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