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AHL22 protein (Arabidopsis thaliana) - STRING interaction network
"AHL22" - AT-hook motif nuclear-localized protein 22 in Arabidopsis thaliana
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AHL22AT-hook motif nuclear-localized protein 22; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). Binds an AT-rich DNA sequences in the FLOWERING LOCUS T (FT) promoter. Acts redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering and regulation of the hypocotyl elongation. Plays a role in both photo- and skotomorphogenesis. Acts as a chromatin remodeling factor that modifies the architecture of FLOWERING LOCUS T (FT) chromatin by modulating both H3 acetylation and methylation leading to the regulation [...] (317 aa)    
Predicted Functional Partners:
HDA9
Histone deacetylase 9; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity); Belongs to the histone deacetylase family. HD type 1 subfamily (426 aa)
       
 
  0.888
HDA6
Histone deacetylase 6; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Might remove acetyl residues only from specific targets, such as rDNA repeats or complex transgenes. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Required for rRNA gene silencing in nucleolar dominance. Plays a role in transgene silencing, but this e [...] (471 aa)
       
 
  0.793
HD1
Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organi [...] (501 aa)
       
 
  0.784
AT3G07750
3’-5’-exoribonuclease family protein; Its function is described as 3’-5’-exoribonuclease activity, RNA binding; Involved in RNA processing; Located in cellular_component unknown; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Exoribonuclease, phosphorolytic domain 2 (InterPro-IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro-IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro-IPR020568); BEST Arabidopsis thaliana protein match is- ribonuclease PH45A (TAIR-AT3G12990.3); Has 1493 Blast hits to 1491 prot [...] (286 aa)
           
  0.617
AT1G70380
F-box and associated interaction domains-containing protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 3 (InterPro-IPR013187), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G70960.1); Has 1387 Blast hits to 1338 proteins in 45 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1387; Viruses - 0; Other Eukaryotes - 0 (source- [...] (377 aa)
           
  0.553
AT2G31425
Plant invertase/pectin methylesterase inhibitor superfamily protein; Its function is described as enzyme inhibitor activity, pectinesterase activity; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Pectinesterase inhibitor (InterPro-IPR006501); BEST Arabidopsis thaliana protein match is- Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR-AT2G31430.1); Has 43 Blast hits to 43 proteins in 6 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (sourc [...] (185 aa)
           
  0.467
SOB3
Predicted AT-hook DNA-binding family protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Acts redundantly with AHL18, AHL22 and AHL27 in the regulation of flowering and regulation of the hypocotyl elongation. Acts redundantly with AHL27/ESC to modulate hypocotyl growth inhibition in response to light (302 aa)
     
   
0.461
ESC
Predicted AT-hook DNA-binding family protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). Negatively regulates plant innate immunity (PTI) to pathogens through the down-regulation of the PAMP-triggered FRK1 expression. Acts redundantly with AHL18, AHL22 and AHL29 in the regulation of flowering and regulation of the hypocotyl elongation. Acts as a chromatin remodeling factor that negatively regulates the leaf senescence. Acts redundantly with AHL29/SOB3 to modulate hypocotyl growth inhibition in response to light (311 aa)
     
   
0.457
AT3G25930
Adenine nucleotide alpha hydrolases-like superfamily protein; Its function is described as molecular_function unknown; Involved in response to stress; Located in cellular_component unknown; Expressed in 7 plant structures; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- UspA (InterPro-IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro-IPR014729); BEST Arabidopsis thaliana protein match is- Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR-AT1G68300.1); Has 150 Blast hits to 150 proteins in 15 species- [...] (154 aa)
     
        0.446
BGLU21
Glycosyl hydrolase superfamily protein; Beta-D-glucosidase active on scopolin >> esculin >> 4- MU-glucoside > DIMBOA-glucoside. No activity with pNP-glucoside, oNP-glucoside and sinigrin as substrates; Belongs to the glycosyl hydrolase 1 family (524 aa)
     
        0.446
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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