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AT2G45540 protein (Arabidopsis thaliana) - STRING interaction network
"AT2G45540" - WD-40 repeat family protein / beige-related in Arabidopsis thaliana
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT2G45540WD-40 repeat family protein / beige-related; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), WD40 repeat 2 (InterPro-IPR019782), Beige/BEACH (InterPro-IPR000409), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IP [...] (3001 aa)    
Predicted Functional Partners:
ECR1
NEDD8-activating enzyme E1 catalytic subunit; Catalytic subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (By similarity); Belongs to the ubiquitin-activating E1 family. UBA3 subfamily (454 aa)
           
  0.903
DAW1
Transducin/WD40 repeat-like superfamily protein; Its function is described as molecular_function unknown; Located in CUL4 RING ubiquitin ligase complex; Expressed in 19 plant structures; Expressed during 7 growth stages; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), WD40 repeat (InterPro-IPR001680), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat, subgroup (InterPro-IPR019781); BEST Arabidopsis thaliana protein match is- transducin family protein / WD-40 repeat family protein (TAIR-AT5G05570.2) (1050 aa)
     
   
  0.650
BBX21
B-box zinc finger protein 21; Transcription activator that acts as positive regulator of seedling photomorphogenesis. Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (331 aa)
           
  0.650
FLD
Flavin containing amine oxidoreductase family protein; Probable histone demethylase that promotes flowering independently of the photoperiod and vernalization pathways by repressing FLOWERING LOCUS C (FLC), a floral repressor that blocks the transition from vegetative to reproductive development. Probably mediates histone H3 ’Lys-4’ demethylation at FLC locus. Seems to act in partial redundancy with LDL1 and LDL2 to repress FLC expression. Required for histone H4 deacetylation of FLC locus. May be a component of the histone deacetylase complex (884 aa)
           
  0.635
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; Its function is described as cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; Involved in protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphoryl [...] (1094 aa)
     
 
  0.571
AT5G53010
Calcium-transporting ATPase, putative; Its function is described as calcium-transporting ATPase activity, calmodulin binding; Involved in cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; Located in membrane; Expressed in egg cell; Contains the following InterPro domains- ATPase, P-type, ATPase-associated domain (InterPro-IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro-IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro-IPR000695), Haloacid dehalogenase-like hydrolase (InterPro-IPR005834), ATPase, P-type cation-tra [...] (1049 aa)
     
   
  0.555
AT4G16630
DEA(D/H)-box RNA helicase family protein; Its function is described as helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; Located in cellular_component unknown; Expressed in cultured cell; Contains the following InterPro domains- RNA helicase, DEAD-box type, Q motif (InterPro-IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro-IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro-IPR000629), DEAD-like helicase, N-terminal (InterPro-IPR014001), DNA/RNA helicase, C-terminal (InterPro-IPR001650), Helicase, superf [...] (789 aa)
           
  0.549
BZS1
B-box zinc finger family protein; Acts as positive regulator of seedling photomorphogenesis. Plays a negative role in brassinosteroid responses (242 aa)
           
  0.531
AT5G05570
Transducin family protein / WD-40 repeat family protein; Its function is described as methyltransferase activity, nucleotide binding, nucleic acid binding; Involved in vesicle-mediated transport, methylation; Located in plasma membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), DNA methylase, N-6 adenine-specific, conserved site (InterPro-IPR002052), WD40 repeat, subgr [...] (1124 aa)
     
   
  0.509
SPI
Beige/BEACH domain ;WD domain, G-beta repeat protein; Involved in cell morphogenesis. May have a function in membrane fusion or membrane composition. Required for salt stress tolerance. Regulates the salt stress-dependent post- transcriptional stabilization, cytoplasmic agglomeration, and localization to P-bodies of a subset of salt stress-regulated mRNAs (3601 aa)
     
   
0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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