STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP131Syntaxin of plants 131; Vesicle trafficking protein that functions in the secretory pathway (306 aa)    
Predicted Functional Partners:
KEU
Sec1/munc18-like (SM) proteins superfamily; Encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis
   
 0.980
SEC1A
Protein transport Sec1a; Involved in the vesicle trafficking. Binds syntaxins (By similarity)
   
 0.977
SEC1B
Sec1/munc18-like (SM) proteins superfamily; Involved in the vesicle trafficking. Binds syntaxins (By similarity)
   
 0.977
NSF
AAA-type ATPase family protein; Involved in vesicle-mediated transport. The ATPase activity of NSF serves to disassemble the SNARE complex, freeing the components for subsequent pairing and fusion events
   
 
 0.925
SEC22
25.3 kDa vesicle transport protein; V-SNARE involved in vesicle trafficking from the ER to the Golgi complex
   
 0.921
ASNAP2
Alpha-soluble NSF attachment protein 2; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it (By similarity); Belongs to the SNAP family
   
 0.916
ASNAP1
Alpha-soluble NSF attachment protein 1; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it (By similarity)
   
 0.916
AT5G50840
Alpha-taxilin-like protein; Contains the following InterPro domains: Taxilin (InterPro:IPR019132); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)
    
 0.916
SYP112
Syntaxin of plants 112; Vesicle trafficking protein that functions in the secretory pathway
     
0.914
SYP124
Syntaxin of plants 124; Vesicle trafficking protein that functions in the secretory pathway
     
0.908
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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