STRINGSTRING
SCPL49 protein (Arabidopsis thaliana) - STRING interaction network
"SCPL49" - SERINE CARBOXYPEPTIDASE-LIKE 49 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCPL49SERINE CARBOXYPEPTIDASE-LIKE 49; Probable carboxypeptidase (516 aa)    
Predicted Functional Partners:
SYP21
Syntaxin of plants 21; Member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane (279 aa)
     
   
  0.698
CHX19
Cation/H(+) antiporter 19; Member of Putative Na+/H+ antiporter family (800 aa)
           
  0.668
CESA4
Cellulose synthase A catalytic subunit 4 [UDP-forming]; Catalytic subunit of cellulose synthase terminal complexes (’rosettes’), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening (1049 aa)
       
 
  0.630
VAM3
Syntaxin/t-SNARE family protein; Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164-220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest [...] (268 aa)
     
   
  0.629
IRX1
Cellulose synthase A catalytic subunit 8 [UDP-forming]; Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling (985 aa)
       
 
  0.628
AT2G45320
Polyphosphatidylinositol phosphatase; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Expressed in 20 plant structures; Expressed during 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species- Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (392 aa)
           
  0.626
CHX15
Cation/hydrogen exchanger 15; Member of Putative Na+/H+ antiporter family (821 aa)
           
  0.625
ATGWD3
Catalytics;carbohydrate kinases;phosphoglucan, water dikinases; Chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position; Belongs to the PEP-utilizing enzyme family (1196 aa)
     
        0.622
OS9
Protein OS-9 homolog; Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Targets the misfolded LRR receptor kinase BRI1 and the misfolded receptor-like kinase EFR; Belongs to the OS-9 family (282 aa)
     
 
  0.614
ALP
Thiol protease aleurain; May play a role in proteolysis leading to mobilization of nitrogen during senescence and starvation (361 aa)
     
   
  0.594
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (14%) [HD]