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EIF4A1 protein (Arabidopsis thaliana) - STRING interaction network
"EIF4A1" - Eukaryotic translation initiation factor 4A-1 in Arabidopsis thaliana
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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EIF4A1Eukaryotic translation initiation factor 4A-1; Belongs to the DEAD box helicase family (415 aa)    
Predicted Functional Partners:
MAGO
Protein mago nashi homolog; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby infl [...] (150 aa)
     
 
  0.997
Y14
RNA-binding (RRM/RBD/RNP motifs) family protein; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA me [...] (202 aa)
     
 
  0.997
AT5G02530
RNA-binding (RRM/RBD/RNP motifs) family protein; Export adapter involved in nuclear export of spliced and unspliced mRNA; Belongs to the ALYREF family (292 aa)
     
 
  0.996
LOS1
Ribosomal protein S5/Elongation factor G/III/V family protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity). Involved in cold responses leading to freezing tolerance via the inductio [...] (843 aa)
     
 
  0.962
At1g07940
GTP binding Elongation factor Tu family protein; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (449 aa)
     
 
  0.943
AT1G09640
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
 
  0.938
AT1G57720
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
 
  0.924
AT1G07920
GTP binding Elongation factor Tu family protein; Its function is described as calmodulin binding, translation elongation factor activity; Involved in translational elongation; Located in mitochondrion, vacuole; Expressed in cotyledon, male gametophyte, guard cell, juvenile leaf, leaf; Expressed during seedling growth; Contains the following InterPro domains- Translation elongation factor EFTu/EF1A, C-terminal (InterPro-IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro-IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro-I [...] (449 aa)
     
 
  0.921
EIF4G
Eukaryotic translation initiation factor 4G; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Plays a role in the accumulation of some potyvirus during viral infection. Required for the accumulation of cucumber mosaic virus 3a protein and turnip crinkle virus p28 replication protein during viral infection. These proteins are necessary for cell-to-cell movement of the virus; Belongs to the eukaryotic initiation factor 4G family (1727 aa)
     
 
  0.903
AT3G12915
Ribosomal protein S5/Elongation factor G/III/V family protein; Its function is described as GTP binding, GTPase activity; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Translation elongation factor EFTu/EF1A, domain 2 (InterPro-IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro-IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro-IPR020568), Protein synthesis factor, GTP-binding (InterPro-IPR000795), Elongation factor G/III/V (InterPro-IPR009022), Translation elongation/initiation fa [...] (820 aa)
     
 
  0.899
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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