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LOI1 protein (Arabidopsis thaliana) - STRING interaction network
"LOI1" - Encodes a pentatricopeptide in Arabidopsis thaliana
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Predicted Interactions
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gene co-occurrence
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textmining
co-expression
protein homology
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LOI1Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase (684 aa)    
Predicted Functional Partners:
CCB203
Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2; Encodes a protein of the mitochondrial membrane which has been shown to be present in a number of unidentified complexes including a 500-KDa complex postulated to have heme lyase activity, in which another protein (AtCCMH, AT1G15220) is also involved. cytochrome c biogenesis orf203; Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family (203 aa)
           
  0.899
COX3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex (265 aa)
           
  0.838
cox3
Cytochrome c oxidase, subunit III; Its function is described as cytochrome-c oxidase activity; Involved in mitochondrial electron transport, cytochrome c to oxygen; Located in membrane; Contains the following InterPro domains- Cytochrome c oxidase, subunit III (InterPro-IPR000298); BEST Arabidopsis thaliana protein match is- cytochrome c oxidase subunit 3 (TAIR-ATMG00730.1); Has 29038 Blast hits to 29025 proteins in 5946 species- Archae - 74; Bacteria - 4466; Metazoa - 19232; Fungi - 401; Plants - 673; Viruses - 0; Other Eukaryotes - 4192 (source- NCBI BLink) (265 aa)
           
  0.838
NAD4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) (495 aa)
           
  0.835
MEF14
Uncharacterized protein At3g26780/MDJ14_6; Phosphoglycerate mutase family protein; Its function is described as catalytic activity; Involved in N-terminal protein myristoylation, metabolic process; Located in cytosol, mitochondrion; Contains the following InterPro domains- Histidine phosphatase superfamily, clade-1 (InterPro-IPR013078), Uncharacterised conserved protein UCP036920, phosphoglycerate mutase, plant X4/Y4 (InterPro-IPR017070); BEST Arabidopsis thaliana protein match is- Phosphoglycerate mutase family protein (TAIR-AT1G12850.1); Has 3099 Blast hits to 3054 proteins in 1059 s [...] (399 aa)
 
       
  0.769
RIP1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; Involved in organellar RNA editing. Required for the processing of numerous RNA editing sites in mitochondria and plastids. Binds to the plastid RARE1 factor, a pentatricopeptide repeat-containing protein involved in RNA editing (395 aa)
           
  0.699
UBP17
Ubiquitin carboxyl-terminal hydrolase 17; Recognizes and hydrolyzes the peptide bond at the C- terminal Gly of ubiquitin. Involved in the processing of poly- ubiquitin precursors as well as that of ubiquitinated proteins (By similarity) (731 aa)
           
  0.673
REN1
Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube (933 aa)
           
  0.673
NAC027
Uncharacterized protein At1g64100; NAC domain containing protein 27 (NAC027); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in multicellular organismal development, regulation of transcription; Located in cellular_component unknown; Contains the following InterPro domains- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- pentatricopeptide (PPR) repeat-containing protein (TAIR-AT1G64100.2); Has 1230 Blast hits to 1227 proteins in 58 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi [...] (161 aa)
           
  0.647
AT5G14080
Tetratricopeptide repeat (TPR)-like superfamily protein; Involved in biological_process unknown; Located in chloroplast; Expressed in 14 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT5G64320.1); Has 28709 Blast hits to 10499 proteins in 259 species- Archae - 3; Bacteria - 9; Metazoa - 215; Fungi - 279; Plants - 27316; Viruses - 0; Other Eukaryotes - 887 (source- NCBI BLink) (634 aa)
           
  0.645
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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