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AT4G22090 protein (Arabidopsis thaliana) - STRING interaction network
"AT4G22090" - Pectin lyase-like superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT4G22090Pectin lyase-like superfamily protein; Its function is described as lyase activity, pectate lyase activity; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), AmbAllergen (InterPro-IPR018082), Pectate lyase/Amb allergen (InterPro-IPR002022), Pectin lyase fold (InterPro-IPR012334); BEST Arabidopsis thaliana protein match is- root hair specific 14 (TAIR-AT4G22080.1); Has 1666 Blast hits to 1661 proteins in 273 species- Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 229 [...] (394 aa)    
Predicted Functional Partners:
AT5G17200
Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in leaf whorl, sperm cell, sepal, flower, pedicel; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Pectin lyase fold (InterPro-IPR012334), Glycoside hydrolase, family 28 (InterPro-IPR000743), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein match is- Pec [...] (421 aa)
       
  0.849
PME31
Pectin methylesterase 31; Acts in the modification of cell walls via demethylesterification of cell wall pectin (By similarity). Acts in a blockwise manner, resulting in a cell wall rigidification; Belongs to the pectinesterase family (317 aa)
 
   
  0.789
AT3G59850
Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in embryo, pedicel; Expressed during 4 anthesis, C globular stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Pectin lyase fold (InterPro-IPR012334), Glycoside hydrolase, family 28 (InterPro-IPR000743), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein match is- Pectin lyase-like superfamily protein (TAIR-AT2G43870.1); H [...] (388 aa)
       
  0.788
ADPG1
Pectin lyase-like superfamily protein; Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding (431 aa)
       
  0.760
QRT1
Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation (380 aa)
 
 
  0.736
AT3G47400
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (594 aa)
 
   
  0.729
PE11
Putative pectinesterase 11; Acts in the modification of cell walls via demethylesterification of cell wall pectin; Belongs to the pectinesterase family (352 aa)
 
   
  0.729
AT5G51500
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (540 aa)
 
   
  0.725
PPME1
Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains’ surrounding cells of the anthers; Belongs to the pectinesterase family (361 aa)
 
   
  0.724
AT5G14650
Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in 7 plant structures; Expressed during F mature embryo stage, LP.02 two leaves visible, petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Glycoside hydrolase, family 28 (InterPro-IPR000743), Pectin lyase fold (InterPro-IPR012334), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein matc [...] (435 aa)
       
  0.724
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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