STRINGSTRING
AT4G24780 protein (Arabidopsis thaliana) - STRING interaction network
"AT4G24780" - Putative pectate lyase 18 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT4G24780Putative pectate lyase 18 (408 aa)    
Predicted Functional Partners:
PME3
Pectinesterase 3; Acts in the modification of cell walls via demethylesterification of cell wall pectin (592 aa)
       
  0.955
AT5G19730
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (383 aa)
   
 
  0.924
AT3G05620
Pectinesterase 22; Acts in the modification of cell walls via demethylesterification of cell wall pectin (543 aa)
   
 
  0.921
QRT1
QUARTET 1; Pectinesterase required for cell type-specific pectin degradation to separate microspores (380 aa)
       
  0.919
AT5G51500
Putative pectinesterase/pectinesterase inhibitor 60; Acts in the modification of cell walls via demethylesterification of cell wall pectin (540 aa)
       
  0.919
AT5G51490
Putative pectinesterase/pectinesterase inhibitor 59; Acts in the modification of cell walls via demethylesterification of cell wall pectin (536 aa)
       
  0.919
AT5G49180
Putative pectinesterase/pectinesterase inhibitor 58 58; Acts in the modification of cell walls via demethylesterification of cell wall pectin (571 aa)
       
  0.919
AT5G27870
Pectinesterase 28; Acts in the modification of cell walls via demethylesterification of cell wall pectin (732 aa)
       
  0.919
AT5G04970
Putative pectinesterase/pectinesterase inhibitor 47; Acts in the modification of cell walls via demethylesterification of cell wall pectin (624 aa)
       
  0.919
PME44
Pectinesterase 44; Acts in the modification of cell walls via demethylesterification of cell wall pectin (525 aa)
       
  0.919
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (13%) [HD]