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PIRL4 protein (Arabidopsis thaliana) - STRING interaction network
"PIRL4" - Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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PIRL4Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction (549 aa)    
Predicted Functional Partners:
AT1G18270
Ketose-bisphosphate aldolase class-II family protein; Its function is described as in 8 functions; Involved in oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Aldolase-type TIM barrel (InterPro-IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro-IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro-IPR008927), Dehydrogenase, multihelical (InterPro-IPR013328), Ketose-bisphosphate aldolase, c [...] (1393 aa)
           
  0.582
AT3G13070
CBS domain-containing protein / transporter associated domain-containing protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF21 (InterPro-IPR002550), Transporter-associated domain (InterPro-IPR005170), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS domain-containing protein / transporter associated domain-containin [...] (661 aa)
       
 
  0.575
AT1G55930
CBS domain-containing protein / transporter associated domain-containing protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF21 (InterPro-IPR002550), Transporter-associated domain (InterPro-IPR005170), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS domain-containing protein / transporter associated domain-containin [...] (653 aa)
       
 
  0.575
AT5G43400
Uncharacterised conserved protein UCP015417, vWA; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- Uncharacterised conserved protein UCP015417, vWA (InterPro-IPR011205); BEST Arabidopsis thaliana protein match is- Uncharacterised conserved protein UCP015417, vWA (TAIR-AT5G43390.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (655 aa)
       
      0.561
RACK1C_AT
Receptor for activated C kinase 1C; Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily (326 aa)
       
      0.561
FAB1C
Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C; The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo- inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity) (1648 aa)
     
   
  0.529
RACK1B_AT
Receptor for activated C kinase 1B; Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily (326 aa)
       
      0.501
AT4G00990
Transcription factor jumonji (jmjC) domain-containing protein; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding; Expressed in 20 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro-IPR003347), Zinc finger, RING-type (InterPro-IPR001841), Transcription factor jumonji (InterPro-IPR013129); BEST Arabidopsis thaliana protein match is- Transcription factor jumonji (jmjC) domain-containing protein (TAIR-AT1G11950.1); Has 966 Blast [...] (840 aa)
           
  0.485
IBM1
Transcription factor jumonji (jmjC) domain-containing protein; IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermeth [...] (1049 aa)
           
  0.485
AT2G15042
Leucine-rich repeat (LRR) family protein; Involved in biological_process unknown; Located in mitochondrion; Contains the following InterPro domains- Leucine-rich repeat (InterPro-IPR001611); BEST Arabidopsis thaliana protein match is- receptor like protein 34 (TAIR-AT3G11010.1); Has 56306 Blast hits to 17936 proteins in 777 species- Archae - 23; Bacteria - 1630; Metazoa - 5114; Fungi - 406; Plants - 45797; Viruses - 0; Other Eukaryotes - 3336 (source- NCBI BLink) (543 aa)
   
          0.433
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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