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AT5G23900 protein (Arabidopsis thaliana) - STRING interaction network
"AT5G23900" - Ribosomal protein L13e family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT5G23900Ribosomal protein L13e family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, membrane; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L13e, conserved site (InterPro-IPR018256), Ribosomal protein L13e (InterPro-IPR001380); BEST Arabidopsis thaliana protein match is- breast basic conserved 1 (TAIR-AT3G49010.3); Has 1807 Blast hits to 1807 proteins in 277 species [...] (206 aa)    
Predicted Functional Partners:
AT2G36160
Ribosomal protein S11 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast, membrane; Expressed in 26 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein S11 (InterPro-IPR001971), Ribosomal S11, conserved site (InterPro-IPR018102); BEST Arabidopsis thaliana protein match is- Ribosomal protein S11 family protein (TAIR-AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2901 specie [...] (150 aa)
     
  0.999
EMB3010
40S ribosomal protein S6-2; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
     
  0.999
AT3G06700
Ribosomal L29e protein family; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit, nucleolus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L29e (InterPro-IPR002673); BEST Arabidopsis thaliana protein match is- Ribosomal L29e protein family (TAIR-AT3G06680.1); Has 764 Blast hits to 764 proteins in 244 species- Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 113; Viruses - 0; Oth [...] (61 aa)
     
  0.999
AT1G74050
Ribosomal protein L6 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane; Expressed in leaf; Contains the following InterPro domains- Ribosomal protein L6, N-terminal (InterPro-IPR005568), Ribosomal protein L6E (InterPro-IPR000915); BEST Arabidopsis thaliana protein match is- Ribosomal protein L6 family protein (TAIR-AT1G74060.1); Has 745 Blast hits to 745 proteins in 281 species- Archae - 16; Bacteria - 0; Metazoa - 335; Fungi - 149; Pl [...] (233 aa)
     
  0.999
AT1G01100
60S acidic ribosomal protein family; Plays an important role in the elongation step of protein synthesis (112 aa)
     
  0.999
AT3G11250
Ribosomal protein L10 family protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (323 aa)
     
  0.999
RPS11-BETA
Encodes a putative ribosomal protein S11 (RPS11-beta) (159 aa)
     
  0.999
AT3G09200
Ribosomal protein L10 family protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
     
  0.999
AT3G02080
Ribosomal protein S19e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein S19e, conserved site (InterPro-IPR018277), Ribosomal protein S19e (InterPro-IPR001266); BEST Arabidopsis thaliana protein match is- Ribosomal protein S19e family protein (TAIR-AT5G15520.1); Has 1131 Blast hits to 1131 proteins in 394 species- Archa [...] (143 aa)
     
  0.999
AT3G02560
Ribosomal protein S7e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; Expressed in 23 plant structures; Expressed during 16 growth stages; Contains the following InterPro domains- Ribosomal protein S7e (InterPro-IPR000554); BEST Arabidopsis thaliana protein match is- Ribosomal protein S7e family protein (TAIR-AT5G16130.1); Has 785 Blast hits to 785 proteins in 311 species- Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 160; V [...] (191 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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