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AT5G58090 protein (Arabidopsis thaliana) - STRING interaction network
"AT5G58090" - Glucan endo-1,3-beta-glucosidase 6 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT5G58090Glucan endo-1,3-beta-glucosidase 6 (477 aa)    
Predicted Functional Partners:
AT3G46650
UDP-glycosyltransferase-like protein (435 aa)
           
  0.803
AT3G61560
Reticulon family protein (264 aa)
           
  0.748
AT1G56145
Leucine-rich repeat transmembrane protein kinase (1039 aa)
           
  0.737
AT3G15480
Uncharacterized protein (175 aa)
           
  0.702
PDLP6
Plasmodesmata-located protein 6; Modulates cell-to-cell trafficking (288 aa)
           
  0.670
RTNLB3
Reticulan like protein B3 (271 aa)
           
  0.670
AT5G24010
Protein kinase superfamily protein (824 aa)
           
  0.649
AT4G27300
S-locus lectin protein kinase-like protein (815 aa)
           
  0.633
CRK2
Cysteine-rich receptor-like protein kinase 2 (649 aa)
           
  0.608
AT5G59700
Protein kinase superfamily protein (829 aa)
           
  0.601
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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