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GATA5 protein (Arabidopsis thaliana) - STRING interaction network
"GATA5" - GATA transcription factor 5 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA5GATA transcription factor 5; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity) (339 aa)    
Predicted Functional Partners:
AGD15
ARF-GAP domain 15; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF) (232 aa)
       
 
  0.780
GATA29
GATA transcription factor 29; Transcriptional regulator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (208 aa)
           
  0.738
GATA26
GATA transcription factor 26; Transcriptional regulator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (526 aa)
           
  0.731
NF-YC13
Nuclear factor Y, subunit C13 (130 aa)
       
 
  0.717
AT3G28780
Uncharacterized protein (674 aa)
           
  0.710
AT5G20885
RING/U-box superfamily protein (176 aa)
           
  0.709
AT4G17800
Putative AT-hook DNA-binding family protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (292 aa)
           
  0.709
ZML2
ZIM-LIKE 2; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (302 aa)
           
  0.675
AT5G66070
RING/U-box superfamily protein (245 aa)
           
  0.670
AT5G37478
TPX2 (targeting protein for Xklp2) family protein (178 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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