node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gid | QueA | PTH_1247 | PTH_1031 | NAD(FAD)-utilizing enzyme possibly; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.780 |
Gid | Sun | PTH_1247 | PTH_1788 | NAD(FAD)-utilizing enzyme possibly; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | tRNA and rRNA cytosine-C5-methylases; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.414 |
PTH_1028 | PTH_1029 | PTH_1028 | PTH_1029 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.851 |
PTH_1028 | QueA | PTH_1028 | PTH_1031 | Uncharacterized protein conserved in bacteria. | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.758 |
PTH_1028 | RuvA | PTH_1028 | PTH_1026 | Uncharacterized protein conserved in bacteria. | Holliday junction resolvasome, DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.535 |
PTH_1028 | RuvB | PTH_1028 | PTH_1027 | Uncharacterized protein conserved in bacteria. | Holliday junction resolvasome, helicase subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.615 |
PTH_1028 | SpoIID-2 | PTH_1028 | PTH_1030 | Uncharacterized protein conserved in bacteria. | Sporulation protein and related proteins. | 0.509 |
PTH_1028 | Tgt | PTH_1028 | PTH_1032 | Uncharacterized protein conserved in bacteria. | Queuine/archaeosine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribos [...] | 0.633 |
PTH_1029 | PTH_1028 | PTH_1029 | PTH_1028 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.851 |
PTH_1029 | QueA | PTH_1029 | PTH_1031 | Hypothetical protein. | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.758 |
PTH_1029 | RuvA | PTH_1029 | PTH_1026 | Hypothetical protein. | Holliday junction resolvasome, DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.645 |
PTH_1029 | RuvB | PTH_1029 | PTH_1027 | Hypothetical protein. | Holliday junction resolvasome, helicase subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.857 |
PTH_1029 | SpoIID-2 | PTH_1029 | PTH_1030 | Hypothetical protein. | Sporulation protein and related proteins. | 0.563 |
PTH_1029 | Sun | PTH_1029 | PTH_1788 | Hypothetical protein. | tRNA and rRNA cytosine-C5-methylases; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.565 |
PTH_1029 | Tgt | PTH_1029 | PTH_1032 | Hypothetical protein. | Queuine/archaeosine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribos [...] | 0.552 |
PTH_1029 | YajC | PTH_1029 | PTH_1033 | Hypothetical protein. | Preprotein translocase subunit YajC. | 0.442 |
QueA | Gid | PTH_1031 | PTH_1247 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | NAD(FAD)-utilizing enzyme possibly; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.780 |
QueA | PTH_1028 | PTH_1031 | PTH_1028 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Uncharacterized protein conserved in bacteria. | 0.758 |
QueA | PTH_1029 | PTH_1031 | PTH_1029 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Hypothetical protein. | 0.758 |
QueA | RuvA | PTH_1031 | PTH_1026 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Holliday junction resolvasome, DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.795 |