STRINGSTRING
Bra000023 protein (Brassica rapa) - STRING interaction network
"Bra000023" - AT2G37840 in Brassica rapa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra000023AT2G37840 (E=0.0) | protein kinase family protein (722 aa)    
Predicted Functional Partners:
Bra019602
AT3G49590 (E=3e-074) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Autophagy-related protein 13 (InterPro-IPR018731); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G18770.1); Has 1841 Blast hits to 549 proteins in 149 species- Archae - 0; Bacteria - 58; Metazoa - 305; Fungi - 125; Plants - 73; Viruses - 5; Other Eukaryotes - 1275 (source- NCBI BLink). (563 aa)
     
  0.994
Bra037564
AT3G18770 (E=1e-213) | LOCATED IN- chloroplast; EXPRESSED IN- 6 plant structures; EXPRESSED DURING- 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Autophagy-related protein 13 (InterPro-IPR018731); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G49590.2); Has 376 Blast hits to 291 proteins in 100 species- Archae - 0; Bacteria - 15; Metazoa - 70; Fungi - 108; Plants - 62; Viruses - 7; Other Eukaryotes - 114 (source- NCBI BLink). (590 aa)
     
  0.979
Bra022353
AT3G18770 (E=2e-050) | LOCATED IN- chloroplast; EXPRESSED IN- 6 plant structures; EXPRESSED DURING- 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Autophagy-related protein 13 (InterPro-IPR018731); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G49590.2); Has 376 Blast hits to 291 proteins in 100 species- Archae - 0; Bacteria - 15; Metazoa - 70; Fungi - 108; Plants - 62; Viruses - 7; Other Eukaryotes - 114 (source- NCBI BLink). (434 aa)
     
  0.975
Bra017973
AT3G49590 (E=6e-032) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Autophagy-related protein 13 (InterPro-IPR018731); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G18770.1); Has 1841 Blast hits to 549 proteins in 149 species- Archae - 0; Bacteria - 58; Metazoa - 305; Fungi - 125; Plants - 73; Viruses - 5; Other Eukaryotes - 1275 (source- NCBI BLink). (317 aa)
     
  0.975
Bra030752
AT1G09020 (E=1e-112) SNF4, ATSNF4 | SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator (379 aa)
     
  0.933
Bra031654
AT1G09020 (E=8e-252) SNF4, ATSNF4 | SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator (488 aa)
     
  0.932
Bra018586
AT1G09020 (E=2e-119) SNF4, ATSNF4 | SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator (439 aa)
     
  0.932
Bra037136
AT5G66930 (E=5e-100) | unknown protein (217 aa)
     
  0.905
Bra012118
AT5G66930 (E=9e-092) | unknown protein (264 aa)
     
  0.905
Bra015924
AT1G74260 (E=0.0) PUR4 | PUR4 (purine biosynthesis 4); ATP binding / catalytic/ phosphoribosylformylglycinamidine synthase (1516 aa)
       
      0.905
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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