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Bra000048 protein (Brassica rapa) - STRING interaction network
"Bra000048" - AT3G51770 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000048AT3G51770 (E=0.0) ETO1 | ETO1 (ETHYLENE OVERPRODUCER 1); protein binding, bridging (934 aa)    
Predicted Functional Partners:
Bra031846
AT5G65800 (E=1e-271) ACS5, CIN5, ETO2, ATACS5 | ACS5 (ACC SYNTHASE 5); 1-aminocyclopropane-1-carboxylate synthase (470 aa)
       
 
  0.688
Bra009539
AT5G03280 (E=0.0) EIN2, PIR2, CKR1, ERA3, ORE3, ORE2, ATEIN2 | EIN2 (ETHYLENE INSENSITIVE 2); transporter (1311 aa)
           
  0.483
Bra005778
AT5G03730 (E=0.0) CTR1, SIS1 | CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase/ protein binding / protein serine/threonine kinase/ protein serine/threonine/tyrosine kinase (795 aa)
           
  0.483
Bra004449
AT2G40940 (E=0.0) ERS1, ERS | ERS1 (ETHYLENE RESPONSE SENSOR 1); ethylene binding / protein histidine kinase/ receptor (611 aa)
           
  0.483
Bra004160
AT1G66340 (E=0.0) ETR1, EIN1, ETR | ETR1 (ETHYLENE RESPONSE 1); ethylene binding / protein histidine kinase/ two-component response regulator (736 aa)
           
  0.483
Bra030199
AT2G22810 (E=6e-229) ACS4, ACC4, ATACS4 | ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4); 1-aminocyclopropane-1-carboxylate synthase (474 aa)
       
 
  0.468
Bra017962
AT3G49700 (E=2e-260) ETO3, ACS9 | ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9); 1-aminocyclopropane-1-carboxylate synthase (470 aa)
       
 
  0.468
Bra012924
AT3G49700 (E=5e-264) ETO3, ACS9 | ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9); 1-aminocyclopropane-1-carboxylate synthase (470 aa)
       
 
  0.468
Bra011784
AT4G37770 (E=8e-255) ACS8 | ACS8; 1-aminocyclopropane-1-carboxylate synthase (469 aa)
       
 
  0.468
Bra010611
AT4G37770 (E=1e-250) ACS8 | ACS8; 1-aminocyclopropane-1-carboxylate synthase (469 aa)
       
 
  0.468
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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