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Bra000064 protein (Brassica rapa) - STRING interaction network
"Bra000064" - AT2G38470 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000064AT2G38470 (E=4e-154) WRKY33, ATWRKY33 | WRKY33; transcription factor (473 aa)    
Predicted Functional Partners:
Bra014393
AT3G62770 (E=8e-179) AtATG18a | AtATG18a (409 aa)
       
 
  0.923
Bra037569
AT3G18690 (E=3e-081) MKS1 | MKS1 (MAP kinase substrate 1); protein binding (217 aa)
     
 
  0.793
Bra000955
AT4G01370 (E=3e-213) ATMPK4, MPK4 | ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase (373 aa)
     
 
  0.718
Bra001716
AT3G18690 (E=2e-084) MKS1 | MKS1 (MAP kinase substrate 1); protein binding (214 aa)
     
 
  0.687
Bra038281
AT3G45640 (E=1e-148) ATMPK3, MPK3 | ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3); MAP kinase/ kinase/ protein binding / protein kinase (333 aa)
     
 
  0.683
Bra016968
AT2G40810 (E=2e-181) ATATG18C | AtATG18c (408 aa)
       
 
  0.633
Bra007700
AT3G62770 (E=1e-159) AtATG18a | AtATG18a (430 aa)
       
 
  0.622
Bra007247
AT3G56440 (E=7e-179) ATATG18D | AtATG18d (799 aa)
       
 
  0.622
Bra003509
AT3G62770 (E=5e-175) AtATG18a | AtATG18a (416 aa)
       
 
  0.622
Bra007265
AT3G56710 (E=2e-042) SIB1 | SIB1 (SIGMA FACTOR BINDING PROTEIN 1); binding / protein binding (149 aa)
     
 
  0.602
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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