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Bra000077 protein (Brassica rapa) - STRING interaction network
"Bra000077" - AT2G38620 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000077AT2G38620 (E=3e-162) CDKB1;2 | CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase (312 aa)    
Predicted Functional Partners:
Bra034614
AT2G27960 (E=4e-040) CKS1, CKS1AT | CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
     
  0.999
Bra017726
AT4G35620 (E=8e-144) CYCB2;2 | CYCB2;2 (Cyclin B2;2); cyclin-dependent protein kinase regulator (406 aa)
     
  0.999
Bra031349
AT3G22310 (E=1e-217) PMH1, ATRH9 | PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding / RNA binding (602 aa)
       
 
  0.998
Bra010722
AT4G38900 (E=8e-131) | bZIP protein (445 aa)
       
      0.998
Bra034380
AT2G27970 (E=2e-037) CKS2 | CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (81 aa)
     
  0.980
Bra036544
AT1G65550 (E=2e-209) | xanthine/uracil permease family protein (987 aa)
     
  0.978
Bra018366
AT2G29680 (E=6e-040) CDC6, ATCDC6 | CDC6 (CELL DIVISION CONTROL 6) (133 aa)
     
  0.977
Bra015569
AT1G07270 (E=2e-202) | cell division control protein CDC6b, putative (CDC6b) (494 aa)
     
  0.977
Bra000473
AT2G29690 (E=5e-290) ASA2, ATHANSYNAB | ASA2 (ANTHRANILATE SYNTHASE 2); anthranilate synthase (1131 aa)
     
  0.977
Bra030517
AT1G02970 (E=6e-151) WEE1, ATWEE1 | WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG); kinase/ protein kinase (933 aa)
     
  0.976
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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