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Bra000084 protein (Brassica rapa) - STRING interaction network
"Bra000084" - AT2G38670 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra000084AT2G38670 (E=2e-164) PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase (377 aa)    
Predicted Functional Partners:
Bra014814
AT3G54470 (E=7e-216) | uridine 5’-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) (474 aa)
     
 
  0.947
Bra003186
AT3G54470 (E=9e-235) | uridine 5’-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) (469 aa)
     
 
  0.947
Bra012049
AT2G26830 (E=8e-167) emb1187 | emb1187 (embryo defective 1187); kinase/ phosphotransferase, alcohol group as acceptor (382 aa)
     
 
  0.758
Bra026899
AT1G13560 (E=2e-099) AAPT1, ATAAPT1 | AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (382 aa)
     
 
  0.757
Bra026519
AT3G25585 (E=5e-160) AAPT2, ATAAPT2 | AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (384 aa)
     
 
  0.757
Bra025147
AT3G25585 (E=3e-199) AAPT2, ATAAPT2 | AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (385 aa)
     
 
  0.757
Bra019718
AT1G13560 (E=2e-165) AAPT1, ATAAPT1 | AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups (416 aa)
     
 
  0.757
Bra038369
AT4G09760 (E=1e-186) | choline kinase, putative (351 aa)
     
 
  0.756
Bra028032
AT4G09760 (E=9e-159) | choline kinase, putative (353 aa)
     
 
  0.756
Bra016126
AT1G71697 (E=1e-176) ATCK1, CK | ATCK1 (CHOLINE KINASE 1); choline kinase (346 aa)
     
 
  0.756
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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