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Bra000124 protein (Brassica rapa) - STRING interaction network
"Bra000124" - AT2G39210 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bra000124AT2G39210 (E=3e-292) | nodulin family protein (600 aa)    
Predicted Functional Partners:
Bra037517
AT5G47970 (E=3e-205) | nitrogen regulation family protein ; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (383 aa)
           
  0.540
Bra040791
AT1G47240 (E=2e-254) NRAMP2, ATNRAMP2 | NRAMP2; inorganic anion transmembrane transporter/ metal ion transmembrane transporter (527 aa)
           
  0.477
Bra040711
AT1G47240 (E=6e-259) NRAMP2, ATNRAMP2 | NRAMP2; inorganic anion transmembrane transporter/ metal ion transmembrane transporter (532 aa)
           
  0.477
Bra012154
AT5G67330 (E=6e-269) ATNRAMP4, NRAMP4 | ATNRAMP4; inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter (512 aa)
           
  0.477
Bra000573
AT2G23150 (E=3e-268) NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter (511 aa)
           
  0.477
Bra031610
AT1G08090 (E=3e-291) ATNRT2-1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1 | ATNRT2-1 (NITRATE TRANSPORTER 2-1); nitrate transmembrane transporter (529 aa)
           
  0.475
Bra030713
AT1G08090 (E=1e-290) ATNRT2-1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1 | ATNRT2-1 (NITRATE TRANSPORTER 2-1); nitrate transmembrane transporter (530 aa)
           
  0.475
Bra002453
AT5G60770 (E=3e-286) ATNRT2.4, NRT2.4 | ATNRT2.4; nitrate transmembrane transporter (527 aa)
           
  0.475
Bra016153
AT3G63510 (E=2e-115) | FAD binding / catalytic/ tRNA dihydrouridine synthase (369 aa)
           
  0.456
Bra039185
AT2G23150 (E=6e-240) NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter (1300 aa)
     
   
  0.408
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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