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Bra000149 protein (Brassica rapa) - STRING interaction network
"Bra000149" - AT2G39770 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra000149AT2G39770 (E=5e-201) CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase (401 aa)    
Predicted Functional Partners:
Bra015883
AT1G74910 (E=2e-223) | ADP-glucose pyrophosphorylase family protein (413 aa)
   
0.991
Bra012235
AT1G20575 (E=6e-134) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (247 aa)
   
  0.971
Bra020621
AT5G28840 (E=2e-216) GME | GME (GDP-D-MANNOSE 3’,5’-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD or NADH binding / catalytic (379 aa)
   
 
  0.971
Bra010011
AT5G28840 (E=6e-218) GME | GME (GDP-D-MANNOSE 3’,5’-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD or NADH binding / catalytic (379 aa)
   
 
  0.971
Bra008171
AT1G74910 (E=5e-195) | ADP-glucose pyrophosphorylase family protein (456 aa)
   
0.963
Bra030345
AT2G04650 (E=7e-222) | ADP-glucose pyrophosphorylase family protein (409 aa)
   
0.962
Bra026714
AT1G16570 (E=6e-258) | glycosyl transferase family 1 protein (465 aa)
   
  0.961
Bra026039
AT1G16570 (E=5e-253) | glycosyl transferase family 1 protein (511 aa)
   
  0.961
Bra039314
AT2G45790 (E=2e-130) ATPMM, PMM | PMM (PHOSPHOMANNOMUTASE); phosphomannomutase ; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (247 aa)
     
 
  0.946
Bra004938
AT2G45790 (E=8e-137) ATPMM, PMM | PMM (PHOSPHOMANNOMUTASE); phosphomannomutase ; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (246 aa)
     
 
  0.946
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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