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Bra000182 protein (Brassica rapa) - STRING interaction network
"Bra000182" - AT2G40290 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Bra000182AT2G40290 (E=1e-162) | eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative (342 aa)    
Predicted Functional Partners:
Bra020136
AT5G20920 (E=1e-106) EIF2 BETA | EIF2 BETA; translation initiation factor (272 aa)
     
  0.997
Bra002341
AT5G20920 (E=1e-111) EIF2 BETA | EIF2 BETA; translation initiation factor (271 aa)
     
  0.997
Bra032525
AT1G04170 (E=3e-262) EIF2 GAMMA | EIF2 GAMMA; translation factor, nucleic acid binding / translation initiation factor (465 aa)
     
  0.996
Bra015292
AT1G04170 (E=2e-259) EIF2 GAMMA | EIF2 GAMMA; translation factor, nucleic acid binding / translation initiation factor (465 aa)
     
  0.996
Bra007447
AT3G59410 (E=0.0) | protein kinase family protein (1243 aa)
     
  0.995
Bra035219
AT4G11420 (E=0.0) EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (968 aa)
     
  0.995
Bra033145
AT4G11420 (E=0.0) EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (993 aa)
     
  0.995
Bra000743
AT4G11420 (E=0.0) EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (982 aa)
     
  0.995
Bra033012
AT2G46280 (E=2e-170) TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (637 aa)
     
  0.994
Bra025277
AT2G46280 (E=2e-110) TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (344 aa)
     
  0.994
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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